Design and Implementation of a Machine Learning Simulation System for Crop Yield Prediction Under Climate Variability
DOI:
https://doi.org/10.33003/fjs-2026-1022-5825Keywords:
Agricultural simulation, Climate variability, Crop yield prediction, Decision support system, Machine learningAbstract
Climate variability continues to threaten agricultural productivity, especially in regions where farming depends heavily on rainfall and temperature conditions. This study presents the design and implementation of a web-based computational simulation system for predicting crop yield under climate variability. The system uses rainfall, temperature, pesticide usage, crop type, country, and land size as input variables to estimate crop yield and total production. Historical crop yield and climate data were processed, filtered, and used to train crop-specific machine learning models. Feature engineering was applied to generate additional predictors, including temperature-rainfall interaction, pesticide intensity, growing degree days, heat stress, cold stress, rainfall categories, logarithmic variables, and squared variables. Random Forest, Gradient Boosting, Ridge Regression, and ensemble models were trained and evaluated. The system was implemented using a Fast API backend, a web-based frontend, interactive visualization components, and an AI-based recommendation module that explains completed prediction results. The results showed strong predictive performance for several crops, with rice achieving the highest test R² value of 0.9617, followed by maize with 0.9080, soybeans with 0.8524, wheat with 0.8157, and potatoes with 0.7841. The study demonstrates that machine learning-based simulation can support crop yield prediction and agricultural decision-making under changing climate conditions, especially in data-limited regions.
References
Agarwal, S., & Tarar, S. (2021). A hybrid approach for crop yield prediction using machine learning and deep learning algorithms. Journal of Physics: Conference Series, 1714(1), 012012. https://doi.org/10.1088/1742-6596/1714/1/012012
Ahmed, F. U., Das, A., & Zubair, M. (2024). A machine learning approach for crop yield and disease prediction integrating soil nutrition and weather factors. 2024 International Conference on Advances in Computing, Communication, Electrical, and Smart Systems (iCACCESS), Dhaka, Bangladesh. https://arxiv.org/abs/2403.19273
Alimagham, S., van Loon, M. P., Ramirez-Villegas, J., Berghuijs, H. N. C., Rosenstock, T. S., & van Ittersum, M. K. (2025). Integrating crop models and machine learning for projecting climate change impacts on crops in data-limited environments. Agricultural Systems, 228, 104367. https://doi.org/10.1016/j.agsy.2025.104367
Baluch, S. M., Wang, L., Faiz, M. A., Li, H., Chen, Y., Wang, L., & Li, M. (2025). Adaptation simulation and planning for crop yield under climate change: Integrating AquaCrop and DSSAT to project drought-induced yield risks in the Sanjiang Plain. Agricultural Water Management, 319, 109818. https://doi.org/10.1016/j.agwat.2025.109818
Banerjee, K., Dutta, S., Das, S., & Sadhukhan, R. (2025). Crop simulation models as decision tools to enhance agricultural system productivity and sustainability: A critical review. Technology in Agronomy, 5, e002. https://doi.org/10.48130/tia-0024-0032
Barati, M. K., Soundharajan, B.-S., & Nikoo, M. R. (2024). Simulation of climate-adaptation responses to rainfall variability on rainfed yield anomalies. Environmental and Sustainability Indicators, 22, 100411. https://doi.org/10.1016/j.indic.2024.100411
Betew, A. G., Gebresenbet, G., Gelaw, G. K., Mengistu, D. A., & Yibre, A. M. (2026). Historical and contemporary crop yield prediction models: Key lessons and innovations. Smart Agricultural Technology, 13, 101672. https://doi.org/10.1016/j.atech.2025.101672
Chisanga, C. B., Phiri, E., & Chinene, V. R. N. (2017). Climate change impact on maize (Zea mays L.) yield using crop simulation and statistical downscaling models: A review. Scientific Research and Essays, 12(18), 167–187. https://doi.org/10.5897/SRE2017.6521
Crane-Droesch, A. (2018). Machine learning methods for crop yield prediction and climate change impact assessment in agriculture. Environmental Research Letters, 13(11), 114003. https://doi.org/10.1088/1748-9326/aae159
El-Mahroug, S. E., Suleiman, A. A., Zoubi, M. M., Al-Omari, S., Abu-Afifeh, Q. Y., Al-Jawaldeh, H. F., Alta’any, Y. A., Al-Nawaiseh, T. M. F., Obeidat, N., Alsoud, S. H., Alshoshan, A. M., Al-Shibli, F. M., & Ta’any, R. (2025). Predictive modeling of climate-driven crop yield variability using DSSAT towards sustainable agriculture. AgriEngineering, 7(5), 156. https://doi.org/10.3390/agriengineering7050156
Ewert, F., Baatz, R., & Finger, R. (2023). Agroecology for a sustainable agriculture and food system: From local solutions to large-scale adoption. Annual Review of Resource Economics, 15, 351–381. https://doi.org/10.1146/annurev-resource-102422-090105
Farah, A. A., Mohamed, M. A., Musse, O. S. H., & Nor, B. A. (2025). The multifaceted impact of climate change on agricultural productivity: A systematic literature review of SCOPUS-indexed studies (2015–2024). Discover Sustainability, 6, 397. https://doi.org/10.1007/s43621-025-01229-2
Hernández Hernández, G. C., Gómez Gómez, J., & Jiménez-Cabas, J. (2025). Predictive models based on artificial intelligence to estimate crop yield: A literature review. Agriculture, 15(23), 2438. https://doi.org/10.3390/agriculture15232438
Hortizuela, R. D., & Palaoag, T. D. (2025). Predicting staple crop yields under climate variability using multiple regression techniques. Indonesian Journal of Electrical Engineering and Computer Science, 40(3), 1531–1538. https://doi.org/10.11591/ijeecs.v40.i3.pp1531-1538
Hu, T., Zhang, X., Bohrer, G., Liu, Y., Zhou, Y., Martin, J., Li, Y., & Zhao, K. (2023). Crop yield prediction via explainable AI and interpretable machine learning: Dangers of black box models for evaluating climate change impacts on crop yield. Agricultural and Forest Meteorology, 336, 109458. https://doi.org/10.1016/j.agrformet.2023.109458
Hultgren, A., Carleton, T., Delgado, M., Gergel, D. R., Greenstone, M., Houser, T., Hsiang, S., Jina, A., Kopp, R. E., Malevich, S. B., McCusker, K. E., Mayer, T., Nath, I., Rising, J., Rode, A., & Yuan, J. (2025). Impacts of climate change on global agriculture accounting for adaptation. Nature, 642, 644–652. https://doi.org/10.1038/s41586-025-09085-w
International Food Policy Research Institute. (2023). Global food policy report 2023: Rethinking food crisis responses. International Food Policy Research Institute. https://doi.org/10.2499/9780896294417
Islam, M. M., Alharthi, M., Alkadi, R. S., Islam, R., & Masum, A. K. M. (2024). Crop yield prediction through machine learning: A path towards sustainable agriculture and climate resilience in Saudi Arabia. AIMS Agriculture and Food, 9(4), 980–1003. https://doi.org/10.3934/agrfood.2024053
Kallenberg, M. G. J., Maestrini, B., van Bree, R., Ravensbergen, P., Pylianidis, C., van Evert, F., & Athanasiadis, I. N. (2023, July). Integrating process-based models and machine learning for crop yield prediction. Paper presented at the 1st Workshop on Synergy of Scientific and Machine Learning Modeling, International Conference on Machine Learning, Honolulu, HI, United States.
Kamangir, H., Sams, B. S., Dokoozlian, N., Sanchez, L., & Earles, J. M. (2024). CMAViT: Integrating climate, management, and remote sensing data for crop yield estimation with multimodel vision transformers. arXiv. https://arxiv.org/abs/2411.16989
Kira, O., Wen, J., Han, J., McDonald, A. J., Barrett, C. B., Ortiz-Bobea, A., Liu, Y., You, L., Mueller, N. D., & Sun, Y. (2024). A scalable crop yield estimation framework based on remote sensing of solar-induced chlorophyll fluorescence (SIF). Environmental Research Letters, 19(4), 044071. https://doi.org/10.1088/1748-9326/ad3142
Kornhuber, K., Lesk, C., Schleussner, C. F., Jägermeyr, J., Pfleiderer, P., & Horton, R. M. (2023). Risks of synchronized low yields are underestimated in climate and crop model projections. Nature Communications, 14, 3528. https://doi.org/10.1038/s41467-023-38906-7
Koukouli, P., Georgiou, P., & Karpouzos, D. (2025). Assessment of the impacts of climate change scenarios on maize yield and irrigation water using the CropSyst model: An application in Northern Greece. Agronomy, 15(3), 638. https://doi.org/10.3390/agronomy15030638
Li, D., Kitsios, V., Newth, D., & O’Kane, T. J. (2025). A Bayesian ensemble projection of climate change and technological impacts on future crop yields. arXiv. https://arxiv.org/abs/2507.21559
Longo, L., Brcic, M., Cabitza, F., Choi, J., Confalonieri, R., Del Ser, J., Guidotti, R., Hayashi, Y., Herrera, F., Holzinger, A., Jiang, R., Khosravi, H., Lecue, F., Malgieri, G., Páez, A., Samek, W., Schneider, J., Speith, T., & Stumpf, S. (2024). Explainable Artificial Intelligence (XAI) 2.0: A manifesto of open challenges and interdisciplinary research directions. Information Fusion, 106, 102301. https://doi.org/10.1016/j.inffus.2024.102301
Maazallahi, A., Thota, S., Kondaboina, N. P., Muktineni, V., Annem, D., Rokkam, A. S., Amini, M. H., Salari, M. A., Norouzzadeh, P., Snir, E., & Rahmani, B. (2024). Naïve Bayes and Random Forest for crop yield prediction. arXiv. https://arxiv.org/abs/2404.15392
Mehryar, S., Yazdanpanah, V., & Tong, J. (2024). AI and climate resilience governance. iScience, 27(6), 109812. https://doi.org/10.1016/j.isci.2024.109812
Morales, A., & Villalobos, F. J. (2023). Using machine learning for crop yield prediction in the past or the future. Frontiers in Plant Science, 14, 1128388. https://doi.org/10.3390/fpls.2023.1128388
Najjar, H., Miranda, M., Nuske, M., Roscher, R., & Dengel, A. (2024). Explainability of sub-field level crop yield prediction using remote sensing. arXiv. https://arxiv.org/abs/2407.08274
Pathak, D., Miranda, M., Mena, F., Sanchez, C., Helber, P., Bischke, B., Habelitz, P., Najjar, H., Siddamsetty, J., Arenas, D., Vollmer, M., Charfuelan, M., Nuske, M., & Dengel, A. (2023). Predicting crop yield with machine learning: An extensive analysis of input modalities and models on a field and sub-field level. arXiv. https://arxiv.org/abs/2308.08948
Paudel, D., Boogaard, H., de Wit, A., Janssen, S., Osinga, S., Pylianidis, C., & Athanasiadis, I. N. (2021). Machine learning for large-scale crop yield forecasting. Agricultural Systems, 187, 103016. https://doi.org/10.1016/j.agsy.2020.103016
Pawlak, K., & Kołodziejczak, M. (2020). The role of agriculture in ensuring food security in developing countries: Considerations in the context of the problem of sustainable food production. Sustainability, 12(13), 5488. https://doi.org/10.3390/su12135488
Saleem, A., Anwar, S., Nawaz, T., Fahad, S., & Saud, S. (2025). Securing a sustainable future: The climate change threat to agriculture, food security, and sustainable development goals. Journal of Umm Al-Qura University for Applied Sciences. https://doi.org/10.1007/s43994-024-00147-w
Seck, N. K. G., Ngom, A., Ngom, P., & Noba, K. (2025). Crop yield forecasting in Senegal: Application of machine learning methods. Discover Agriculture, 3, 192. https://doi.org/10.1007/s44279-025-00381-7
Talaat, F. M. (2023). Crop yield prediction algorithm (CYPA) in precision agriculture based on IoT techniques and climate changes. Neural Computing and Applications, 35(23), 17281–17292. https://doi.org/10.1007/s00521-023-08619-5
Tasneem, K. T., Shahzad, M. U., Rashid, J., Othman, K. M., Zafar, T., & Faheem, M. (2025). Predicting rice yield and impact of climate change on rice production using machine learning models. Theoretical and Applied Climatology, 156, 665. https://doi.org/10.1007/s00704-025-05912-2
Timlin, D., Paff, K., & Han, E. (2024). The role of crop simulation modeling in assessing potential climate change impacts. Agrosystems, Geosciences & Environment, 7(1), e20453. https://doi.org/10.1002/agg2.20453
Venugopal, A., Aparna, S., Mani, J., Mathew, R., & Williams, V. (2021). Crop yield prediction using machine learning algorithms. International Journal of Engineering Research & Technology, 9(13), 87–91.
Yadav, B., Krishnan, P., Parihar, C. M., & Banerjee, K. (2025). Modelling crop growth and soil hydrothermal regimes under conservation agriculture using APSIM-wheat. Scientific Reports, 15, 36362. https://doi.org/10.1038/s41598-025-20211-6
Yang, Y., Yang, Y., Han, S., Macadam, I., & Liu, D. L. (2014). Prediction of cotton yield and water demand under climate change and future adaptation measures. Agricultural Water Management, 144, 42–53. https://doi.org/10.1016/j.agwat.2014.06.001
Zare, M., Azam, S., & Sauchyn, D. (2023). Simulation of climate change impacts on crop yield in the Saskatchewan Grain Belt using an improved SWAT model. Agriculture, 13(11), 2102. https://doi.org/10.3390/agriculture13112102
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